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Handling Outliers in Data cleaning

Definition: Outliers are extreme data values that deviate significantly from other observations in a dataset, often lying far outside the overall pattern and potentially arising from measurement errors, natural variation, or rare events.


🚨 Section 1: Why They're a Problem

  • Distort key statistics like mean and variance

  • Can mislead data analysis and interpretations

  • Skew predictive models and hypothesis tests


🧭 Section 2: Where They Come From

  • Errors: Data entry mistakes or equipment failures

  • Natural Variation: Legitimate unusual events in the population

  • Rare Events: Genuine but infrequent anomalies, like a CEO’s salary or a record-breaking measurement.


🦒 Section 3: Examples

  • A giraffe that’s 2 meters tall in a herd of 5-meter giants? That’s an outlier.

  • A ₹5 crore salary in a dataset of ₹50,000 jobs? Also an outlier.


🧹 Section 4: What to Do About Them

  • Identify outliers using statistical methods (Z-score, IQR, visualization)

  • Remove outliers if they're errors or unjustifiable values

  • Correct values when possible (e.g., fixing typos)

  • Transform the data (log, binning) if distribution is heavily skewed.


Image by Author
Image by Author



Outlier Detection and Handling


Detection and Handling outliers can vary depending on the context. Some of the options are listed below with Pros and cons.


Option

Use Case

Techniques

Pros

Cons

1. Visualize to Highlight Outliers

When outliers reveal meaningful insights or anomalies (e.g., fraud, spikes, errors)

- Scatter plots / Box plots - Conditional formatting - Tooltips with metrics - Dynamic filters/slicers

- Preserves original data for transparency - Supports anomaly detection - Helps stakeholders understand variability

- May clutter visuals - Can skew averages if not handled carefully.

2. Replace or Remove Outliers

When outliers skew analysis or metrics disproportionately, and removal is justified

- Z-score / IQR detection - Replace with mean/median - Remove via Power Query

- Cleaner visualizations - Stable aggregations - Better for predictive modelling

- Risk of losing insights - May affect data integrity if not documented well.

3. Segment and Isolate Outliers

When outliers form distinct behaviour groups (e.g., VIP customers, seasonal spikes)

- Create separate categories or flags for outliers -Use Clustering algorithms (e.g., K-means, DBSCAN) to isolate patterns. - Separate models for outlier segments

- Preserves insights without contaminating general trends - Enables tailored strategies

- Requires more complex modelling - Risk of biased segmentation

4. Transform the Data Distribution

When data is heavily skewed and transformations can normalize it for better statistical modelling

- Log / Square root / Box-Cox transformations - Binning / Discretization - Scaling (e.g., Min-Max, Robust Scaler)

- Reduces impact of extreme values - Improves model performance and interpretability

- May obscure original value meaning - Requires careful explanation to stake holders

5. Flag and Monitor Over Time

When outliers may evolve into trends or signal emerging risks

- Time-series anomaly detection (e.g., Prophet, ARIMA) - Rolling windows & thresholds - Real-time monitoring alert systems

- Enables proactive decisions - Supports dynamic environments

- Needs robust infrastructure for tracking - Risk of false positives

🧩 Bonus Tip: Combine Approaches

Often, the best strategy is hybrid:

  • Visualize first to understand

  • Segment or transform if needed

  • Replace/remove only when justified.


This checklist can guide a balanced, evidence-driven decision to keep or remove outliers based on the nature of the data, analysis purpose, and domain insights.


 Here is a checklist of metrics and criteria to justify keeping vs removing outliers:


Metrics and Criteria to Justify Keeping Outliers

  • Outlier represents a legitimate, rare but meaningful event or behaviour intrinsic to the data context (e.g., fraud detection, rare sales spikes).

  • Consistent with domain knowledge indicating the value is plausible and important.

  • Does not violate assumptions of the analysis or model, or model used is robust to outliers.

  • Dataset is small or data scarcity means removal significantly reduces information.

  • Impact on overall analysis or results corresponds to meaningful variability, not noise.

  • Outliers form identifiable sub-groups that should be segmented for separate analysis.


Metrics and Criteria to Justify Removing Outliers

  • Outlier is due to known data entry or measurement errors (e.g., negative values where impossible).

  • Inconsistent with domain knowledge or outside the scope of the study population.

  • Excessively skews key statistics and misleads conclusions (mean, variance).

  • Violates assumptions critical for analysis or modeling (e.g., normality).

  • Dataset is sufficiently large that removal does not compromise statistical power.

  • Analytical goals require stable or generalizable models less sensitive to extreme values.


Additional Considerations

  • Use statistical tests or thresholds (e.g., Z-score beyond ±3, IQR 1.5 times rule) as initial flags.

  • Compare results with and without outliers to assess their influence on findings.

  • Record and document all decisions and rationales clearly for transparency and reproducibility.


Thank you for reading!


 

 
 

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